Science can't prove historical facts, except to establish consistency between the alleged past and the observable present. "People (in general) can rise from the dead" is a scientific claim. "One specific person rose from the dead once" is a historical claim.

Imagine. Science develops to the point where we can completely understand the universe. We create a program that accurately simulates a down-scaled version of the universe. In such a world, are we not the "creators" of a new universe that is fully compatible with all scientific theories?